CDS

Accession Number TCMCG057C09473
gbkey CDS
Protein Id XP_018470923.1
Location join(38989106..38989684,38989808..38990100,38990175..38990241,38990327..38990597,38990678..38990874,38990954..38991163,38991266..38991379,38991448..38991573,38991660..38991824,38991908..38992249,38992322..38992455,38992545..38992893,38992973..38993159,38993237..38993286,38993375..38993812,38993909..38994071,38994179..38994346,38994432..38994856)
Gene LOC108842497
GeneID 108842497
Organism Raphanus sativus

Protein

Length 1425aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018615421.1
Definition PREDICTED: DNA topoisomerase 2 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category B
Description Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03032        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K03164        [VIEW IN KEGG]
EC 5.99.1.3        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko01524        [VIEW IN KEGG]
map01524        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000075        [VIEW IN EMBL-EBI]
GO:0000278        [VIEW IN EMBL-EBI]
GO:0000280        [VIEW IN EMBL-EBI]
GO:0000712        [VIEW IN EMBL-EBI]
GO:0000819        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003916        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006310        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0007059        [VIEW IN EMBL-EBI]
GO:0007093        [VIEW IN EMBL-EBI]
GO:0007127        [VIEW IN EMBL-EBI]
GO:0007131        [VIEW IN EMBL-EBI]
GO:0007346        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016853        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0031570        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035825        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044774        [VIEW IN EMBL-EBI]
GO:0045132        [VIEW IN EMBL-EBI]
GO:0045786        [VIEW IN EMBL-EBI]
GO:0045930        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048285        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051304        [VIEW IN EMBL-EBI]
GO:0051307        [VIEW IN EMBL-EBI]
GO:0051321        [VIEW IN EMBL-EBI]
GO:0051726        [VIEW IN EMBL-EBI]
GO:0061982        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0098813        [VIEW IN EMBL-EBI]
GO:0140013        [VIEW IN EMBL-EBI]
GO:0140097        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1903046        [VIEW IN EMBL-EBI]
GO:1903047        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCTACCAAAATCCCTCTGCAAACCAGCAACAACGTCAACGTCGCCGCGAAGGCGCCGCCGGCGGCAGCTTCTCGAGGCGGCGGGAAGACGATCGAGGAGATGTACCAGAAGAAATCACAGCTCGAGCACATCTTGCTCCGTCCCGATACCTACATCGGATCCATCGAGAAGCACACCCAGACTCTCTGGGTGTACGAGAACGAGGAGATGGTGAACCGCCCCGTCACTTACGTCCCGGGGCTGTACAAGATCTTCGACGAGATTCTGGTGAACGCTGCCGACAACAAGCAGCGGGATCCGAAGATGGATTTCCTCAAAGTGGTGATCGATGTCGAGCAGAATCTGATCAGCGTCTGTAACAGTGGCGATGGAGTCCCCGTCGAGATCCATCAGGAGGAAGGCGTGTATGTTCCCGAGATGATCTTTGGTCATCTGTTGACTAGTAGTAACTACAATGATAACGAGAAGAAGACTACTGGTGGGAGAAACGGTTACGGAGCGAAGCTTGCGAACATCTTCTCCACGGAGTTCACGATTGAAACTGCCGATGGGAAGAGGCAGAAGAAGTACAAGCAGGTGTTTGAGAACAACATGGGGAAGAAGTCTGAACCGGTTATAACCAAGTGCAATAAGAGCGAGAACTGGACCAAAGTCTCGTTCAAACCTGACTTGGGGAAATTCGGGATGACTCATTTGGAGGACGATGTTGTTGCTCTCATGAGTAAACGAGTGTTTGATATTGCCGGATGTTTGGGAAAGACTGTGAAGGTGGAGCTGAATGGTCAACGGATTCCAATCAAATCGTTCACTGATTATGTTGATCTGTACCTGAACGCAGCCAACAAGTCAAGGACTGAGCCTCTCCCAAGGATGGTCGAGAAAGTTAATGACAGATGGGAGGTTTGTGTGAGCATTAGTGAAGGACAGTTCCAACAGGTCAGCTTTGTGAACTCTATTGCTACAATCAAGGGTGGGACGCATGTTGACTATGTTACCAGTCAGATCACTAACTACATTGTGGGCATCGTGAACAAGAAGAACAAAACCGCTAACGTCAAGGCACACAATGTTAAGAACCATCTGTGGGTATTCGTCAACTCCTTGATTGACAACCCTGCTTTTGATTCACAAACCAAAGAAACATTGACCCTTCGTCAGAGCAGTTTCGGGTCTAAATGCGAGCTTTCAGAAGATATTTTGAAGAAAGTGGCTAAATCTGGAGTAGTGGAAAATTTGCTTTCATGGGCAACTTTTAAGCAGAGTAAAGACCTTAAGAAAAGCGATGGAACTAAGGCTGACAGGGTTCAGGTTGAGAAGTTGGAGGACGCTAACAAAGCTGGGGGGAAGGAATCCCAACGCTGTACCTTGATTCTGACTGAAGGAGACTCAGCTAAGGCTTTAGCTATGGCGGGGATGTCTGTTGTGGGTCGTGACTATTACGGTGTGTTCCCTCTCCGAGGAAAGTTACTGAATGTTAGGGAAGCTACCACCACTCAAATCACTAACAATAAGGAAATTGAGAATATCAAGAAGATCCTTGGACTGAAGCAAAATGTGAAGTATGAAAACGTTAACTCACTGAGATATGGGCATATGATGATCATGACAGATCAGGATCACGATGGTTCCCATATAAAGGGTCTCTTAATCAACTTCATCCACTCCTTTTGGCCAACATTACTCAAGGTTCCATCGTTCCTAGTTGAGTTTATCACACCCATTGTGAAGGCTACGCGCAAGACTGGAGGTTCTCGCAAGGCTGAAGTTCTGTCATTTTACTCGATGCCTGAGTACGAAAGCTGGAAAGAAAGTCTGAGTGGTAATGCAAGCGGTTGGACTATTAAATACTACAAGGGATTGGGAACAAGTACATCCGCGGAGGGCAAAGAGTACTTTGAAAGCCTCGATATTCACAAAAAGGATTTCATTTGGGAGGATGAACAAGATGGAGATGCGATTGAGCTTGCATTTAGTAAAAAGAAAATCGAAGCTCGAAAGAATTGGCTTTCACATTTTGAGCCTGGAACTCATCTTGATCAGAAGCAACAGAAAATCTCCTTCAGTGATTTCGTAAACAAGGAACTTATCTTATTCTCCATGGCTGATCTTCAAAGGTCAATTCCTTCCATGGTTGATGGGCTCAAACCCGGCCAGAGAAAGATACTCTTTTGTTCGTTTAAGAGGAATTTCACAAGGGAGGCCAAGGTTGCCCAATTCTCTGGTTATGTATCAGAGCACTCGGCATACCATCACGGCGAGCAGAGTCTTGCCGGTACGATCATTGGTATGGCACAGGATTATGTAGGCAGCAACAACATAAACCTGCTTCAACCAGGTGGTCAATTCGGCACACGGAATATGGGTGGAAAAGATGCAGCAAATGCTAGATATATTTACACTAAGCTGTCTTCAGCAACAAGGGTCTTGTTTCCCAAGGATGACGATGTCCTCCTTAATTACTTGAATGAAGATGGGCAGAAGATAGAGCCTACTTGGTACATGCCCATCATTCCAACTGTGCTTGTCAATGGTTGTGAAGGAATTGGAACCGGGTGGAGTTCTTTCATACCTAACTATAACCCACGAGATATTGTTGCCAACGTAAGGCGTCTACTTAGTGGTGAAAGTATGGTGGCTATGGATCCTTGGTATAGGAATTTTAAAGGAACTATTGAGAAAACTGCATCCAAGGAAGGTGGGTCTTCCTACACTGTCACTGGTGTATACGAGGAGATTGACGAAACAACTCTCCGTATTACGGAGCTACCAATCAGAAGGTGGACCGAAGATTATAAGCAGTTTCTGGAGGCTTTGAAGACAACTAATAACACCCCCTATATTCAGAGTGTTAAGGCGTACAATGATGATAGATCTGTGGATTTTGAGCTTCATCTTAGTGAGGAGAACATGACGATGGCTCGGCAAGAGGGCATTTTGAAGTTACTCAAACTTACCACGACAATCGCTACAACAAATATGCATCTTTTTGATGAAAACAATTTGATTAAGAAATACGCAACTCCAGAACAAATCCTTGAAGAGTTCTTCGAACTCAGGCTCCAATATTATGGGAAGAGAAAGAAAGTTATCCTGGAGAATCTGGAACTTGAACTCTTGAAACTAGAGAACAAAGTGAGGTTTATTCTTGGAGTTGTCAGTGGAGATATCATAGTGAACAACAGGAGGAAGGCTGATCTTGTCCAGGAGTTGGGACAGAAAGGGTTCACACCATTCCCCAAGAAGGCCAAGCCTGTCGAAGCGGCGGTTGCAGGAGCAACGGATACAGCTGAAGAAGAATCTGAAGAAACCTCAGAAGTTCCTGCTTCACGCTCAACGTTTATATCTGGTTCGGAGTATGACTACCTGTTGTCACTGGCTATAGCTACGTTGACTCTAGAGAAAGTGCAGGAGTTATGTGGAGAGAGAGATAAAATTAAGCAAGCTGTTGAAGACATGAAGAAGGCCACGCCAAGATCTCTCTGGCTCAGAGACCTAGACTCTCTTGATGCAGAACTCGATAAACTTGACCAGGAAGATGCTACAGCCGAAATAGAGAGAGAGGCAGCACAAAAGAAGCTCAGAAACGAGGCTGGAGCACCACTAAAGGGTGGTAAAGCAGCGCCAAGGAAACAGGCACCAAAGAAAACAACAAAGGCGGCTTCCAGTTCTGCAATGGAGATAGGTGACAACGTAGTGGAAGTGCCCAAGCCGAAAGGTAGACAAGGAGCCAAAAAGAAGGCGCCTGCTGCTGCTGCTCCAGCTGATGTAAAGGCTGATGATGATGAGATGTTGGATCTAGCACAAAGGCTTGCTAAATCCAATTTCGGTTCCACCACTGAGAATCCAAGCAAAGCGGCAATATCTTTGGATGACGATGATGACGACGTGGTGGTTGAAGTTGCTGCACCAGCAAAAGGAGGAAGGAAACCAGCGGCTGCGAGTAAAGCCGTGAAACCACCGGCAGCTCCGAGAAAGCGTGGACCAGCGGCGAGCAAGAAGCAGCCAGCAGCGGAGGTTGTTGCTGCTTCACCGGAGAAGAAAGTGAGGAAGATGAGATCTTCCCCGTTCAACAAGAAGAGTAGTTCAGTGTTGGGGAGGTTGGCTAACAAGGAAGGAGAGGAGGAGGAGAGTACTGAGACCGTGGTCGTTGGAAACTCATCGAGGCCAAAAAGAGCAAACAGGAAGGCGATGAAGTATGTGCTGAGTGATTCGGAGAGTGAGTCCGGGAATGATTCTGAGTTTGATGATATTGAAGACGACGAGGATGATGAGTAG
Protein:  
MATKIPLQTSNNVNVAAKAPPAAASRGGGKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQTLWVYENEEMVNRPVTYVPGLYKIFDEILVNAADNKQRDPKMDFLKVVIDVEQNLISVCNSGDGVPVEIHQEEGVYVPEMIFGHLLTSSNYNDNEKKTTGGRNGYGAKLANIFSTEFTIETADGKRQKKYKQVFENNMGKKSEPVITKCNKSENWTKVSFKPDLGKFGMTHLEDDVVALMSKRVFDIAGCLGKTVKVELNGQRIPIKSFTDYVDLYLNAANKSRTEPLPRMVEKVNDRWEVCVSISEGQFQQVSFVNSIATIKGGTHVDYVTSQITNYIVGIVNKKNKTANVKAHNVKNHLWVFVNSLIDNPAFDSQTKETLTLRQSSFGSKCELSEDILKKVAKSGVVENLLSWATFKQSKDLKKSDGTKADRVQVEKLEDANKAGGKESQRCTLILTEGDSAKALAMAGMSVVGRDYYGVFPLRGKLLNVREATTTQITNNKEIENIKKILGLKQNVKYENVNSLRYGHMMIMTDQDHDGSHIKGLLINFIHSFWPTLLKVPSFLVEFITPIVKATRKTGGSRKAEVLSFYSMPEYESWKESLSGNASGWTIKYYKGLGTSTSAEGKEYFESLDIHKKDFIWEDEQDGDAIELAFSKKKIEARKNWLSHFEPGTHLDQKQQKISFSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFTREAKVAQFSGYVSEHSAYHHGEQSLAGTIIGMAQDYVGSNNINLLQPGGQFGTRNMGGKDAANARYIYTKLSSATRVLFPKDDDVLLNYLNEDGQKIEPTWYMPIIPTVLVNGCEGIGTGWSSFIPNYNPRDIVANVRRLLSGESMVAMDPWYRNFKGTIEKTASKEGGSSYTVTGVYEEIDETTLRITELPIRRWTEDYKQFLEALKTTNNTPYIQSVKAYNDDRSVDFELHLSEENMTMARQEGILKLLKLTTTIATTNMHLFDENNLIKKYATPEQILEEFFELRLQYYGKRKKVILENLELELLKLENKVRFILGVVSGDIIVNNRRKADLVQELGQKGFTPFPKKAKPVEAAVAGATDTAEEESEETSEVPASRSTFISGSEYDYLLSLAIATLTLEKVQELCGERDKIKQAVEDMKKATPRSLWLRDLDSLDAELDKLDQEDATAEIEREAAQKKLRNEAGAPLKGGKAAPRKQAPKKTTKAASSSAMEIGDNVVEVPKPKGRQGAKKKAPAAAAPADVKADDDEMLDLAQRLAKSNFGSTTENPSKAAISLDDDDDDVVVEVAAPAKGGRKPAAASKAVKPPAAPRKRGPAASKKQPAAEVVAASPEKKVRKMRSSPFNKKSSSVLGRLANKEGEEEESTETVVVGNSSRPKRANRKAMKYVLSDSESESGNDSEFDDIEDDEDDE